Information for 4-CTCATTATTGAAAAGT (Motif 9)

A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T
Reverse Opposite:
C G T A A T G C C G A T C G A T A C G T A C G T A G T C G T C A G T C A C G A T C G T A C T G A A C G T A C T G C G T A C T A G
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.798
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 22.4bp
Average Position of motif in Background65.9 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCATTATTGAAAAGT
AGCTCATTAT--------
 A C G T A C G T A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATTATTGAAAAGT
GCAACCTCATTATNNNN----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CTCATTATTGAAAAGT
NNNACCTCATTATCNTN----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C A C G T A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCATTATTGAAAAGT--
--NNNTATTGAATTGNNN
 A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T A C G T A C G T
A C G T A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0197.1_Zfp105_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCATTATTGAAAAGT
NAAANTTATTGAANCAN
 A C G T A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCATTATTGAAAAGT
NCTAATTA---------
 A C G T A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T
T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTCATTATTGAAAAGT
AAAGCTAATTAGCGAAA---
 A C G T A C G T A C G T A C G T A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CTCATTATTGAAAAGT
-------TGGAAAA--
 A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTCATTATTGAAAAGT
-----NATGGAAAAN-
 A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

PH0029.1_En2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTCATTATTGAAAAGT
TGCACTAATTAGTGGAA---
 A C G T A C G T A C G T A C G T A G T C A C G T G T A C G T C A A G C T A C G T C G T A A C G T A C G T A C T G C G T A G T C A C G T A C G T A A T C G A C G T
C G A T T C A G G T A C T G C A G A T C G A C T G C T A C G T A C G A T C A G T C T G A C T A G A G C T A T C G T C A G G C T A G C A T A C G T A C G T A C G T