Information for 3-TTCAGGSTTGTGT (Motif 7)

C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T
Reverse Opposite:
C G T A A T G C G T C A A G T C C G T A C G T A T A C G G T A C A G T C C G A T A T C G C T G A G C T A
p-value:1e-11
log p-value:-2.686e+01
Information Content per bp:1.734
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif3.10%
Number of Background Sequences with motif91.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets54.3 +/- 21.9bp
Average Position of motif in Background50.9 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCAGGSTTGTGT--
GYCTGGYYTNTGTCA
 C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T A C G T A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Pax6/MA0069.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCAGGSTTGTGT-
TTCACGCATGAGTT
 C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTCAGGSTTGTGT------
---NNNNTTGTGTGCTTNN
 C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTCAGGSTTGTGT--
GTCATGCHTGRCTGS
 C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TTCAGGSTTGTGT--
------ATTGTTTAN
 C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTCAGGSTTGTGT---
-NNNCCATTGTGTNAN
 C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T A C G T A C G T A C G T
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGGSTTGTGT--
NGTCACGCTTGGCTGC
 A C G T C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

ELF1/MA0473.2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGGSTTGTGT
NACTTCCGGGTT----
 A C G T A C G T A C G T C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T
A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TTCAGGSTTGTGT
-CCWGGAATGY--
 C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T
A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TTCAGGSTTGTGT
GGTCTGGCAT----
 A C G T C A G T A G C T A T G C C G T A C T A G C A T G A T G C G A C T A C G T A C T G A C G T A T C G C G A T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T