Information for 1-CTCAAGGTGATTA (Motif 3)

G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A
Reverse Opposite:
A C G T C T G A C G T A A C G T A G T C C G T A A T G C A G T C A G C T A C G T A C T G C G T A A C T G
p-value:1e-12
log p-value:-2.869e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.2 +/- 20.4bp
Average Position of motif in Background38.9 +/- 10.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTCAAGGTGATTA
-TCAAGGTCATA-
 G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Esrra/MA0592.2/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTCAAGGTGATTA
TTCAAGGTCAT--
 G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTCAAGGTGATTA
-TCAAGGTCAT--
 G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

PH0071.1_Hoxc6/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTCAAGGTGATTA------
--CAAATTAATTAATAAAA
 G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C T G A G C T A T C G A C A G T G A C T G C T A C G T A C G A T C G A T C T G A G T C A A C G T C G T A T C G A T G C A C G T A

PH0052.1_Hoxa5/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CTCAAGGTGATTA------
---ACGGTAATTAGCTCAG
 G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C C T A G A C T G G A C T G T C A G T C A A C G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A C T A G

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCAAGGTGATTA--
TATTCAAGGTCATGCGA
 A C G T A C G T G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

PH0049.1_Hoxa2/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTCAAGGTGATTA------
---AAGGTAATTAGCTCAT
 G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTCAAGGTGATTA
BTCAAGGTCA---
 G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:9
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CTCAAGGTGATTA--
-----AGTAATTAAC
 G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

PH0053.1_Hoxa6/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTCAAGGTGATTA------
---AAGGTAATTACCTAAT
 G T A C G C A T A G T C C G T A C T G A C T A G A T C G A C G T C T A G C G T A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T