Information for 6-ATTGCCAAAG (Motif 16)

C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G
Reverse Opposite:
A G T C A C G T A G C T A C G T A C T G C A T G A G T C C G T A C G T A C G A T
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.884
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif130.1
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets57.2 +/- 29.7bp
Average Position of motif in Background45.5 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATTGCCAAAG
GGTGCCAAGT
 C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ATTGCCAAAG
-TTGCCAAG-
 C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATTGCCAAAG
CGTGCCAAG-
 C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ATTGCCAAAG
--TGCCAA--
 C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTGCCAAAG
ATTGCGCAAC
 C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G
T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTGCCAAAG-
ATTGCACAATA
 C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATTGCCAAAG
ATTGCATAA-
 C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATTGCCAAAG
ATTGCGCAAT
 C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G
T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPB/MA0466.2/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTGCCAAAG
ATTGCGCAAT
 C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G
T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPD/MA0836.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATTGCCAAAG
ATTGCGCAAT
 C G T A C G A T A C G T C T A G G T A C A G T C G T C A C T G A C G T A A C T G
T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T