Information for 5-TGGGTAATCA (Motif 15)

C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A
Reverse Opposite:
C G A T C T A G G C T A G C A T C A G T T G C A A T G C G T A C G T A C G C T A
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.666
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif9.79%
Number of Background Sequences with motif1662.6
Percentage of Background Sequences with motif3.35%
Average Position of motif in Targets51.6 +/- 25.1bp
Average Position of motif in Background50.7 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EVX1/MA0887.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TGGGTAATCA--
--GNTAATTANN
 C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A A C G T A C G T
A C G T A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

EVX2/MA0888.1/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TGGGTAATCA--
--NNTAATTANN
 C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A A C G T A C G T
A C G T A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

MEOX2/MA0706.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGGGTAATCA--
--AGTAATTAAC
 C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A A C G T A C G T
A C G T A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

PH0061.1_Hoxb6/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGGGTAATCA----
TATTGGTAATTACCTT
 A C G T A C G T C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A A C G T A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

PH0023.1_Dlx4/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTAATCA------
GTCGGTAATTATNGNGN
 A C G T C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PH0022.1_Dlx3/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGGGTAATCA------
NNNGGTAATTATNGNGN
 A C G T C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PH0053.1_Hoxa6/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGGGTAATCA----
NTNAGGTAATTACCTT
 A C G T A C G T C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A A C G T A C G T A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

HOXA2/MA0900.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGGGTAATCA--
--GNTAATTANN
 C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A A C G T A C G T
A C G T A C G T A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G

PH0072.1_Hoxc8/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGGGTAATCA----
TTGGGGTAATTAACGT
 A C G T A C G T C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A A C G T A C G T A C G T A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGGGTAATCA--
--GNTAATTAGN
 C G A T C A T G C A T G T A C G A C G T G T C A C G T A C G A T G A T C G C T A A C G T A C G T
A C G T A C G T A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C