Information for 9-TTGAATCCATGGATTT (Motif 14)

C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T
Reverse Opposite:
C G T A C G T A C G T A C G A T A G T C G T A C C G T A A C G T A C T G T A C G C G T A C A G T A G C T G T A C C G T A C G T A
p-value:1e-9
log p-value:-2.178e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 8.9bp
Average Position of motif in Background28.0 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TTGAATCCATGGATTT--
--------ATTGATTYND
 C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TTGAATCCATGGATTT-
-------CNGTGATTTN
 C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TTGAATCCATGGATTT----
---AAAACATCGTTTTTAAG
 C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TTGAATCCATGGATTT
ACTATGAATGAATGAT---
 A C G T A C G T A C G T C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TTGAATCCATGGATTT---
-----ATTATCGATTTTTT
 C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT1/MA0679.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTGAATCCATGGATTT---
-----ANTATCGATTTTTN
 C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:TTGAATCCATGGATTT---
-----NTTATTGATTTTTT
 C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:TTGAATCCATGGATTT--
--------VRGGATTARN
 C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:TTGAATCCATGGATTT
--------NGGGATTA
 C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TTGAATCCATGGATTT
------CCATTGTTC-
 C G A T A C G T C A T G C T G A G T C A A C G T A G T C G T A C C G T A A C G T A C T G A C T G C G T A A C G T A C G T C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T