Information for 3-GCTGGCYTSH (Motif 11)

A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A
Reverse Opposite:
C A G T A T G C G C T A T C G A A T C G A G T C G T A C C G T A A T C G A T G C
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.698
Number of Target Sequences with motif106.0
Percentage of Target Sequences with motif14.25%
Number of Background Sequences with motif3388.0
Percentage of Background Sequences with motif7.08%
Average Position of motif in Targets55.3 +/- 25.7bp
Average Position of motif in Background50.2 +/- 33.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCTGGCYTSH
-TTGGCA---
 A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCTGGCYTSH
NTTGGCANN-
 A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGCYTSH
GGTTGGCAT--
 A C G T A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGCYTSH
NGCTN------
 A C G T A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCTGGCYTSH
GGTCTGGCAT--
 A C G T A C G T A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGGCYTSH-
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGCYTSH
NNACTTGCCTT-
 A C G T A C G T A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCTGGCYTSH
NAACAGCTGG-----
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTGGCYTSH
WDNCTGGGCA--
 A C G T A C G T A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCTGGCYTSH---
-GTGGCGTGACNG
 A T C G A T G C C G A T A C T G A C T G A T G C A G C T C G A T A T C G G T C A A C G T A C G T A C G T
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G