Information for 6-CCTTSCTTCCTTCCCT (Motif 9)

A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T
Reverse Opposite:
G T C A C T A G A T C G A T C G C T G A C T G A T A C G A C T G T G C A C T G A A T C G T A C G C G T A C T G A A C T G T C A G
p-value:1e-9
log p-value:-2.239e+01
Information Content per bp:1.777
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif54.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets60.3 +/- 22.5bp
Average Position of motif in Background47.4 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:CCTTSCTTCCTTCCCT--
CCTTCCTTCCTTCCTTCC
 A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T A C G T A C G T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

E2F6/MA0471.1/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTTSCTTCCTTCCCT
NCTTCCCGCCC-----
 A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTTSCTTCCTTCCCT
YCTTTGTTCC------
 A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF263/MA0528.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCTTSCTTCCTTCCCT-----
TCCTCCTCCCCCTCCTCCTCC
 A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C G A T C G A C T G A T C G A T C G A C T A G T C G A T C G A T C G A T C A G T C A G C T A G T C G T A C C G A T A T G C G T A C G A C T A G T C G A T C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCTTSCTTCCTTCCCT-
-----KGCCCTTCCCCA
 A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CCTTSCTTCCTTCCCT
----GCTTCC------
 A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCTTSCTTCCTTCCCT
--TTCCCGCCWG----
 A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CCTTSCTTCCTTCCCT
CAKCTGKYCYYTTYCCC-
 A C G T A C G T A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCTTSCTTCCTTCCCT
NYTTCCCGCC------
 A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CCTTSCTTCCTTCCCT
--NNAYTTCCTGHN--
 A G T C A G T C A G C T A C G T A T G C A T G C A G C T A C G T A G T C A T G C A G C T A G C T A T G C A T G C G A T C A C G T
A C G T A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T