Information for 3-AAGYCWTCTS (Motif 13)

T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G
Reverse Opposite:
A T G C G T C A T C A G G C T A C G A T A T C G T C A G A T G C C G A T A G C T
p-value:1e-9
log p-value:-2.129e+01
Information Content per bp:1.598
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.69%
Number of Background Sequences with motif231.6
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets58.4 +/- 23.7bp
Average Position of motif in Background49.0 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAGYCWTCTS--
--GCCATCTGTT
 T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----AAGYCWTCTS-
AGGGAAGTCATTTCT
 A C G T A C G T A C G T A C G T T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGYCWTCTS
AAAAGTCAA---
 A C G T A C G T T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAGYCWTCTS----
--GCCAGCTGBTNB
 T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAGYCWTCTS-----
CCNNACCATCTGGCCTN
 A C G T A C G T T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAGYCWTCTS--
--ACCATCTGTT
 T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAGYCWTCTS-
AAGGCAAGTGT
 T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAGYCWTCTS--
--RCCATMTGTT
 T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G A C G T A C G T
A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGYCWTCTS----
--NVCAGCTGBBNN
 T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

PROX1/MA0794.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGYCWTCTS-
TAAGGCGTCTTG
 A C G T T C G A G C T A A T C G A G T C A T G C G C T A C G A T A G T C C A G T T A C G A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G