Information for 7-AGMTGCTMRKGRCAAR (Motif 12)

C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A
Reverse Opposite:
A G C T A G C T A C G T A C T G A G C T A G T C G T C A A G C T A C T G C G T A A C T G A G T C C G T A A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.839
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.3 +/- 17.9bp
Average Position of motif in Background62.4 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGMTGCTMRKGRCAAR
CTCAGCAGCTGCTACTG-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGMTGCTMRKGRCAAR
AGCAGCTGCT---------
 A C G T A C G T A C G T C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGMTGCTMRKGRCAAR
CAGCTGNT---------
 A C G T C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGMTGCTMRKGRCAAR
AGATGCTRCTRCCHT-
 C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGMTGCTMRKGRCAAR
NCAGCTGCTG--------
 A C G T A C G T C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGMTGCTMRKGRCAAR
AGCAGCTGCTNN-------
 A C G T A C G T A C G T C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGMTGCTMRKGRCAAR
CGCAGCTGCG---------
 A C G T A C G T A C G T C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AGMTGCTMRKGRCAAR
NNVVCAGCTGBN---------
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGMTGCTMRKGRCAAR
ACAGCTGTTV--------
 A C G T A C G T C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------AGMTGCTMRKGRCAAR-
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G T G A C A C G T A C T G G T A C A C G T T G A C C T G A A C G T A C T G C T G A A G T C C G T A C T G A C T G A A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A