Information for 5-TTTTYTTGAARTT (Motif 4)

C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T
Reverse Opposite:
G C T A C G T A A G C T C G A T C G A T A G T C G C T A C G T A C T A G T C G A C T G A G T C A G C T A
p-value:1e-18
log p-value:-4.344e+01
Information Content per bp:1.638
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif8.31%
Number of Background Sequences with motif1151.6
Percentage of Background Sequences with motif2.41%
Average Position of motif in Targets53.4 +/- 25.9bp
Average Position of motif in Background51.0 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTTYTTGAARTT
NATTTCCNGGAAAT-
 A C G T A C G T C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTTYTTGAARTT--
NNTTCCTTTGATCTNNA
 A C G T A C G T C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTTYTTGAARTT
NNNTTTCCTGGAAA--
 A C G T A C G T A C G T C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTYTTGAARTT-
TNCCTTTGATCTTN
 C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTYTTGAARTT
TTTCTNAGAAAN-
 C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTTTYTTGAARTT
--CCTTTGATGT-
 C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTTYTTGAARTT-
ANATTTTTGCAANTN
 A C G T C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTYTTGAARTT
TTTCCTGGAAA--
 C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTTYTTGAARTT
TNCCTTTGATGT-
 C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTTYTTGAARTT--
TTTCCTGGAAAGNNN
 C G A T C A G T A G C T A G C T A G T C C G A T C G A T A C T G G C T A C G T A T C G A A C G T C G A T A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A