Information for 9-AGCCGGGCGC (Motif 18)

C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A G T C A G T C G T A C A C T G A C T G A G T C A C G T
p-value:1e-5
log p-value:-1.247e+01
Information Content per bp:1.962
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif47.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.0 +/- 20.9bp
Average Position of motif in Background41.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCCGGGCGC-
NGCCTGAGGCN
 C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AGCCGGGCGC---
-----GGCGCGCT
 C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCCGGGCGC-
TGCCTGAGGCN
 C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCCGGGCGC---
NNGCNCTGCGCGGC
 A C G T C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGCCGGGCGC-
AGCCTCAGGCA
 C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCCGGGCGC---
ATTGCCTCAGGCAAT
 A C G T A C G T C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGCCGGGCGC-
DCHCAGCAGGRGGCC
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCCGGGCGC---
ATTGCCTGAGGCAAT
 A C G T A C G T C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCGGGCGC
CAGCC------
 A C G T C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCCGGGCGC-------
AGCTCGGCGCCAAAAGC
 C G T A A C T G A G T C A G T C A C T G A C T G A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C