Information for 8-ATTTCAAAAC (Motif 6)

T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C
Reverse Opposite:
T C A G A C G T A C G T C A G T G C A T A C T G G T C A T G C A G T C A A G C T
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.555
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif239.6
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets62.0 +/- 19.6bp
Average Position of motif in Background48.3 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--ATTTCAAAAC
CGGTTTCAAA--
 A C G T A C G T T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTTCAAAAC-
ATTGCACAATA
 T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C A C G T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTTCAAAAC-
SCTGTCARCACC
 A C G T T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTTCAAAAC
NATTCAAAT-
 T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATTTCAAAAC
ACATCAAAGG
 T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTTCAAAAC--
NCWRWGTAAACANSV
 A C G T A C G T A C G T T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATTTCAAAAC------
ATATCAAAACAAAACA
 T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

FOXO4/MA0848.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATTTCAAAAC
--GTAAACA-
 T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C
A C G T A C G T T C A G C G A T T G C A G T C A C T G A G A T C C G T A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATTTCAAAAC
TATGTAAATAT
 A C G T T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTTCAAAAC
NCTAAGTAAACA-
 A C G T A C G T A C G T T C G A C A G T A C G T C A G T G T A C C G T A G T C A T G C A T G C A A G T C
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T