Information for 6-KGCCTTGYWSCTCTTT (Motif 3)

A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T
Reverse Opposite:
G T C A C G T A C G T A A C T G C T G A A C T G A T C G C G T A C T G A A T G C G T C A C T G A C T A G A T C G G T A C G T A C
p-value:1e-13
log p-value:-3.200e+01
Information Content per bp:1.794
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.5 +/- 20.7bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:KGCCTTGYWSCTCTTT
TGCCTGCGYCMCCTT-
 A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:2
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:KGCCTTGYWSCTCTTT--
----TACTTCCTCTTTTN
 A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-KGCCTTGYWSCTCTTT
AGGCCTAG---------
 A C G T A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---KGCCTTGYWSCTCTTT
BNTGDCCTTG---------
 A C G T A C G T A C G T A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:5
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:KGCCTTGYWSCTCTTT
-------TTCCTCT--
 A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-KGCCTTGYWSCTCTTT
CTGTCTGTCACCT----
 A C G T A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-KGCCTTGYWSCTCTTT
AGGCCTNG---------
 A C G T A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.47
Offset:1
Orientation:forward strand
Alignment:KGCCTTGYWSCTCTTT
-YCTTTGTTCC-----
 A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----KGCCTTGYWSCTCTTT
GTCACGCTTGGCTGCNCNN-
 A C G T A C G T A C G T A C G T A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:KGCCTTGYWSCTCTTT--
--------NSCACTYVAV
 A C T G A C T G A T G C A G T C G A C T A C G T A T C G A G C T C G A T T A G C A G T C A G C T A G T C A C G T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G