Information for 13-ATGTGTTCCAGACACA (Motif 21)

C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C T G A C T G C G T A C G T A A G T C C G T A A G T C C G T A A C G T
p-value:1e-5
log p-value:-1.243e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.7 +/- 4.5bp
Average Position of motif in Background45.5 +/- 19.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:ATGTGTTCCAGACACA
-------CCAGACAG-
 C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:ATGTGTTCCAGACACA-
-------CCAGACRSVB
 C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATGTGTTCCAGACACA---
--CAAATCCAGACATCACA
 C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATGTGTTCCAGACACA
----ATGCCAGACN--
 C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATGTGTTCCAGACACA
--CTGTTCCTGG----
 C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATGTGTTCCAGACACA
--AGGTGHCAGACA--
 C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ATGTGTTCCAGACACA
--AGGTGNCAGACAG-
 C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:ATGTGTTCCAGACACA
-------BCAGACWA-
 C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ATGTGTTCCAGACACA
---TTTTCCA------
 C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ATGTGTTCCAGACACA
CTAAGGTTCTAGATCAC
 A C G T C G T A A C G T A C T G A C G T A C T G A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C C G T A
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C