Information for 4-CGTTTCCGAGGCC (Motif 9)

A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C A C G T A G T C A C T G A C T G C T G A C G T A C G T A A G T C A C T G
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.4 +/- 26.7bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CGTTTCCGAGGCC-
------CTAGGCCT
 A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CGTTTCCGAGGCC-
------CNAGGCCT
 A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGTTTCCGAGGCC--
-GGGGCCGAGGCCTG
 A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGTTTCCGAGGCC
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGTTTCCGAGGCC
ATTTTCCATT---
 A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGTTTCCGAGGCC-
----NTCAAGGTCA
 A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGTTTCCGAGGCC-
NGTTGCCATGGCAA
 A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGTTTCCGAGGCC--
-GTTGCCATGGNAAC
 A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGTTTCCGAGGCC
NRYTTCCGGY---
 A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGTTTCCGAGGCC
-HTTTCCCASG--
 A G T C C T A G A C G T A C G T A G C T A G T C A G T C C T A G G T C A A C T G A C T G A G T C A G T C
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T