Information for 3-CAAAAAATGC (Motif 7)

G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C
Reverse Opposite:
A C T G A G T C C T G A A G C T A C G T A C G T G A C T A C G T A C G T C T A G
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.847
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.58%
Number of Background Sequences with motif64.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets52.4 +/- 25.4bp
Average Position of motif in Background50.6 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CAAAAAATGC----
GAAAAAATTGCAAGG
 A C G T G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C A C G T A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CAAAAAATGC
TACTGGAAAAAAAA-
 A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAAAAAATGC------
-TAAAAATGCTGACTT
 G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAAAAAATGC
NACAGGAAAT--
 A C G T A C G T G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CAAAAAATGC
GTTCAAAAAAAAAATTC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAAAAAATGC
VRAACAATGG
 G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

CDX1/MA0878.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAAAAATGC
GCAATAAAA--
 A C G T G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C
T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAAAAAATGC
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAAAAAATGC
-NAACAAT--
 G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAAAAAATGC
CCAATAAAAA-
 A C G T G A T C C G T A C G T A C T G A C G T A T C G A C T G A A G C T C T A G A G T C
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T