Information for 10-CTTGAAGATC (Motif 19)

A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C G T A C G T A G T C C G T A C G T A A C T G
p-value:1e-5
log p-value:-1.356e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 27.4bp
Average Position of motif in Background36.6 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Esrra/MA0592.2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTGAAGATC--
-TTCAAGGTCAT
 A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTTGAAGATC
--NGAAGC--
 A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTTGAAGATC--
--TCAAGGTCAT
 A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CTTGAAGATC
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTTGAAGATC---
--TCAAGGTCATA
 A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

POL005.1_DPE/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTTGAAGATC--
---GAAGATGTT
 A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTGAAGATC------
TATTCAAGGTCATGCGA
 A C G T A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTTGAAGATC
TGACCTTGAN----
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTTGAAGATC
CCACTTGAA----
 A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTTGAAGATC----
TAATGATGATCACTA
 A C G T A G T C A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A