Information for 9-TGATCCCAGG (Motif 20)

A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A
p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.2 +/- 23.8bp
Average Position of motif in Background67.9 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGATCCCAGG
ATAATCCC---
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGATCCCAGG
HTTTCCCASG
 A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGATCCCAGG--
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCAGG--
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGATCCCAGG--
--TGCCCAGNHW
 A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGATCCCAGG
TTAATCCC---
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGATCCCAGG
CTTAATCCC---
 A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGATCCCAGG--
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGATCCCAGG---
-GTCCCCAGGGGA
 A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGATCCCAGG
TAATCCCN--
 A C G T A C T G C G T A A C G T A G T C A G T C A G T C C G T A A C T G A C T G
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T