Information for 3-GGAGCCCCGMSAGCCA (Motif 17)

A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
Reverse Opposite:
A G C T A C T G A T C G A G T C G A C T A T C G A C G T T G A C A C T G A C T G A C T G A C T G A G T C A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.094e+01
Information Content per bp:1.806
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.8 +/- 30.4bp
Average Position of motif in Background36.9 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCCCGMSAGCCA
CGGAGC-----------
 A C G T A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCCCCGMSAGCCA
TTGGGGGCGCCCCTAG-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGAGCCCCGMSAGCCA
TATCGACCCCCCACAG---
 A C G T A C G T A C G T A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGAGCCCCGMSAGCCA
--TGCCCTGAGGGCA-
 A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGAGCCCCGMSAGCCA
--TGCCCNNAGGGCA-
 A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGAGCCCCGMSAGCCA
--TGCCCTNAGGGCA-
 A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCCCGMSAGCCA
GGGAGGACNG-------
 A C G T A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGAGCCCCGMSAGCCA
-AAGACCCYYN-----
 A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGAGCCCCGMSAGCCA
----TGCCCCCGGGCA
 A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGCCCCGMSAGCCA
NNNNGGTACCCCCCANN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C T A G A G T C A G T C A G T C T G A C A C T G G T C A T A G C C G T A A C T G A T G C A G T C C T G A
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C A C G T A C G T A C G T A C G T