Information for 5-GGGCTGCCAG (Motif 10)

T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G
Reverse Opposite:
G T A C A G C T C A T G T C A G G A T C G T C A A C T G A G T C A T G C A G T C
p-value:1e-10
log p-value:-2.465e+01
Information Content per bp:1.696
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.32%
Number of Background Sequences with motif1128.4
Percentage of Background Sequences with motif2.37%
Average Position of motif in Targets50.3 +/- 26.1bp
Average Position of motif in Background50.8 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGGCTGCCAG-
-VGCTGWCAVB
 T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGCTGCCAG-
GGTGYTGACAGS
 A C G T T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGGCTGCCAG---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGGCTGCCAG
--RHTGWCAR
 T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGCTGCCAG
-GGTTGGCAT
 T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGGCTGCCAG-
---TTGCCAAG
 T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGCTGCCAG----
-AGGTGNCAGACAG
 T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGGCTGCCAG-
TATTATGGGATGGATAA
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGCTGCCAG
-ARNTGACA-
 T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGGCTGCCAG
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G A C T G T G A C C A G T C T A G A G T C G T A C C T G A A C T G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T