Information for 1-GGCTYATCCM (Motif 8)

C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A
Reverse Opposite:
A C G T C T A G A C T G C T G A C G A T C T G A C T G A C T A G T A G C A G T C
p-value:1e-11
log p-value:-2.632e+01
Information Content per bp:1.705
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif6.54%
Number of Background Sequences with motif912.5
Percentage of Background Sequences with motif1.87%
Average Position of motif in Targets45.9 +/- 23.8bp
Average Position of motif in Background48.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0015.1_Crx/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGCTYATCCM-----
AGGCTAATCCCCAANG
 A C G T C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGCTYATCCM
-GCTAATCC-
 C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGCTYATCCM
---TTTTCCA
 C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGCTYATCCM
TKCTGTTCCA
 C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

Pitx1/MA0682.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGCTYATCCM
--TTAATCCC
 C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A
A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGCTYATCCM
--ATAATCCC
 C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGCTYATCCM
-CTTAATCCC
 C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGCTYATCCM-
-NYTAATCCYB
 C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGCTYATCCM-
-GCTAATCCCC
 C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGCTYATCCM-
-CCTAATCCGC
 C T A G A T C G A G T C A G C T G A C T C G T A A G C T A G T C A G T C G T C A A C G T
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C