Information for 15-TTTAGATCAGTTGDCA (Motif 22)

A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A
Reverse Opposite:
C G A T A C T G G A C T A T G C C G T A C T G A A T G C A G C T A C T G C T G A A C G T G T A C C G A T C G T A C G T A G T C A
p-value:1e-8
log p-value:-2.042e+01
Information Content per bp:1.759
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 14.4bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTTAGATCAGTTGDCA
---GKVTCADRTTWC-
 A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A
A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:TTTAGATCAGTTGDCA
--------ARNTGACA
 A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTTAGATCAGTTGDCA
---GKMTCADRTTWC-
 A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A
A C G T A C G T A C G T C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:TTTAGATCAGTTGDCA
----NAHCAGCTGD--
 A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.54
Offset:10
Orientation:forward strand
Alignment:TTTAGATCAGTTGDCA--
----------YTGWCADY
 A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

PB0047.1_Myf6_1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TTTAGATCAGTTGDCA-
-GAAGAACAGGTGTCCG
 A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A A C G T
A C G T T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

TFAP4/MA0691.1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TTTAGATCAGTTGDCA
-----ATCAGCTGTT-
 A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A T G C C G T A A T C G T A G C A C G T A C T G C G A T A C G T A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TTTAGATCAGTTGDCA
-----ATCACGTGAC-
 A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TTTAGATCAGTTGDCA
-----ATCACGTGAC-
 A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:TTTAGATCAGTTGDCA-
---------CTTGGCAA
 A C G T A C G T C G A T C G T A A C T G G T C A A G C T A G T C C T G A A T C G A G C T A C G T A T C G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A