Information for 1-GGAGTGGTTTCTTCCA (Motif 1)

A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A
Reverse Opposite:
C G A T C T A G A C T G G C T A C T G A C T A G T G C A C G T A C T G A A G T C G T A C C G T A A G T C A C G T A G T C A G T C
p-value:1e-17
log p-value:-3.957e+01
Information Content per bp:1.822
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.9 +/- 14.6bp
Average Position of motif in Background37.6 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGAGTGGTTTCTTCCA-
--AGATGCTRCTRCCHT
 A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTGGTTTCTTCCA
CTTGAGTGGCT-------
 A C G T A C G T A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGAGTGGTTTCTTCCA
AGAAATGACTTCCCT--
 A C G T A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GGAGTGGTTTCTTCCA
-CAGCTGTTTCCT---
 A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:5
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGTGGTTTCTTCCA
NNNGGGHAGCAHRTGCTRCC-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A
A T G C A G T C G C A T C T A G A C T G C T A G G A C T C G T A C T A G A G T C T G C A G C A T C T G A A C G T T C A G A G T C A C G T C T A G A G T C A G T C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTGGTTTCTTCCA
TTGAGTGSTT-------
 A C G T A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTGGTTTCTTCCA
GGGGGCGTGGN--------
 A C G T A C G T A C G T A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A
C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-GGAGTGGTTTCTTCCA
TTRAGTGSYK-------
 A C G T A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.48
Offset:9
Orientation:forward strand
Alignment:GGAGTGGTTTCTTCCA
---------GCTTCC-
 A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--GGAGTGGTTTCTTCCA
TGGGTGTGGCN-------
 A C G T A C G T A C T G A C T G C G T A C T A G C G A T A C T G A C T G A G C T A C G T A C G T A G T C A G C T C G A T A G T C A G T C C G T A
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T