Information for 11-GGGATCCCACCGCCAC (Motif 25)

A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G A G T C A C T G A C T G A C G T A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C
p-value:1e-3
log p-value:-8.788e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGATCCCACCGCCAC
GGGGATTCCCCC-----
 A C G T A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGGATCCCACCGCCAC
----CCCCTCCCCCAC
 A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGGATCCCACCGCCAC----
---TACGCCCCGCCACTCTG
 A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGGATCCCACCGCCAC-----
----TCACCCCGCCCCAAATT
 A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGGATCCCACCGCCAC-
---CCCCCGCCCCCGCC
 A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

SP8/MA0747.1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGGATCCCACCGCCAC-
-----GCCACGCCCACT
 A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGGATCCCACCGCCAC
-----CCAACTGCCA-
 A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGGATCCCACCGCCAC
------CCCCCCCCAC
 A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGGATCCCACCGCCAC-
-----GCCACRCCCACY
 A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

SP3/MA0746.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGGATCCCACCGCCAC
-----GCCACGCCCCC
 A C T G A C T G A C T G C G T A A C G T A G T C A G T C A G T C C G T A A G T C A G T C A C T G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C