Information for 12-GAAAGGGCCAAAT (Motif 19)

A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-9.482e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGGCCAAAT
GGAGAAAGGTGCGA--
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAAAGGGCCAAAT
---CGTGCCAAG-
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GAAAGGGCCAAAT
-----TGCCAA--
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GAAAGGGCCAAAT
---GGTGCCAAGT
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGGCCAAAT--
CTCCAGGGGTCAATTGA
 A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGGCCAAAT-
TCTCAAAGGTCACGAG
 A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGGGCCAAAT
ANGNAAAGGTCA---
 A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GAAAGGGCCAAAT-
GGGRAARRGRMCAGMTG
 A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAAAGGGCCAAAT--
ARGAGGMCAAAATGW
 A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAAAGGGCCAAAT-
GGCAAAAGTCCAATAA
 A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T