Information for 7-CACTGTGAGAGAT (Motif 15)

A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T A G T C A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C T G
p-value:1e-4
log p-value:-9.482e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CACTGTGAGAGAT
CAATCACTGGCAGAAT-
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACTGTGAGAGAT
-GCTGTG------
 A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CACTGTGAGAGAT
NNNACCGAGAGTNNN
 A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CACTGTGAGAGAT----
GATATTGACAGCTGCGT
 A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CACTGTGAGAGAT---
----ATGATKGATGRC
 A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CACTGTGAGAGAT--
-----TGATTGATGA
 A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CACTGTGAGAGAT
NNNCCATTGTGTNAN--
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CACTGTGAGAGAT
CTCATTGTC------
 A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.50
Offset:-8
Orientation:reverse strand
Alignment:--------CACTGTGAGAGAT
NNNNTGAGCACTGTNNG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:10
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CACTGTGAGAGAT---
-ACCGTGACTAATTNN
 A G T C C G T A A G T C A C G T A C T G A C G T A C T G C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A