Information for 9-AKAACAAGWA (Motif 9)

C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A
Reverse Opposite:
C G A T C G A T A G T C C G A T C G A T A T C G G A C T G C A T G T C A A G C T
p-value:1e-9
log p-value:-2.194e+01
Information Content per bp:1.773
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif63.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.9 +/- 22.5bp
Average Position of motif in Background51.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AKAACAAGWA
NTTNAGAACAATTA
 A C G T A C G T A C G T A C G T C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AKAACAAGWA---
NNNTAACAATTATAN
 A C G T A C G T C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PH0084.1_Irx3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AKAACAAGWA----
NNTATTACATGTANNNT
 A C G T A C G T A C G T C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AKAACAAGWA----
ANTATTACATGTANNNN
 A C G T A C G T A C G T C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PB0063.1_Sox13_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AKAACAAGWA---
TTAAGAACAATAAATT
 A C G T A C G T A C G T C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AKAACAAGWA---
TTTAGAACAATAAAAT
 A C G T A C G T A C G T C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AKAACAAGWA----
NNTTTTACATGTANNNT
 A C G T A C G T A C G T C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AKAACAAGWA
ATGTCACAACAACAC
 A C G T A C G T A C G T A C G T A C G T C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AKAACAAGWA-
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AKAACAAGWA----
ANTNNTACATGTANNTN
 A C G T A C G T A C G T C T G A C A G T C G T A C T G A A T G C C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T