Information for 13-AATTAAATTC (Motif 14)

C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.069e+01
Information Content per bp:1.530
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif10.37%
Number of Background Sequences with motif3168.5
Percentage of Background Sequences with motif6.63%
Average Position of motif in Targets50.6 +/- 26.0bp
Average Position of motif in Background49.9 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROP1/MA0715.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AATTAAATTC
TAATTAAATTA
 A C G T C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AATTAAATTC
TAATTAAATTA
 A C G T C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AATTAAATTC
TAATTAAATTA
 A C G T C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AATTAAATTC
-ATTAAA---
 C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:5
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----AATTAAATTC-
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

Arid3b/MA0601.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AATTAAATTC
NTAATTAATAT-
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:7
Score:0.73
Offset:-6
Orientation:forward strand
Alignment:------AATTAAATTC-
CGAATTAATTAAATACT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

MNX1/MA0707.1/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AATTAAATTC
GGTAATTAAA---
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C
C T A G T A C G A G C T G T C A G T C A G A C T C G A T C G T A C G T A G T C A A C G T A C G T A C G T

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AATTAAATTC
GCAATAAAAA--
 A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C
T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:10
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------AATTAAATTC-
NNAATTAATTAAAAANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T