Information for 11-CTTGGACAGG (Motif 12)

A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C T A G A C G T A G T C A G T C C G T A C G T A A C T G
p-value:1e-6
log p-value:-1.598e+01
Information Content per bp:1.966
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 25.7bp
Average Position of motif in Background60.2 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTTGGACAGG
--TTGACAGC
 A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTTGGACAGG
--TTGACAGG
 A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGACAGG-----
NTATTGACAGGTNNTN
 A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGACAGG-----
GGATTGACAGGTCNTT
 A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGACAGG-----
GTATTGACAGGTNNTT
 A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTTGGACAGG----
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGACAGG-----
NTATTGACAGCTNNTT
 A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGACAGG-----
NNATTGACAGGTGCTT
 A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTGGACAGG
CCAGGAACAG-
 A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

REST/MA0138.2/Jaspar

Match Rank:10
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------CTTGGACAGG---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C