Information for 5-CATTGGACATTGC (Motif 4)

G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G G T A C C G T A G T C A A C G T C T A G C G A T A T G C G T A C G T C A C T G A C A G T A C T G
p-value:1e-13
log p-value:-3.126e+01
Information Content per bp:1.786
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 16.7bp
Average Position of motif in Background66.5 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CATTGGACATTGC--
NNATTGGACTTTNGNN
 A C G T G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

SOX8/MA0868.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATTGGACATTGC-
AACACTGCACATTGTT
 A C G T A C G T G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C A C G T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATTGGACATTGC------
---TGGACTTTGNNCTNTG
 G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATTGGACATTGC----
-ATTGGACTTTGACCCC
 G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CATTGGACATTGC-----
---TGGACTTTGNNCTCN
 G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CATTGGACATTGC----
-----GGGATTGCATNN
 G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CATTGGACATTGC
---GGGGATTTCC
 G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PH0061.1_Hoxb6/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CATTGGACATTGC---
TATTGGTAATTACCTT
 G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CATTGGACATTGC-
----GGAAATTCCC
 G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CATTGGACATTGC-
------ACATTCCA
 G T A C G C T A A G C T A C G T A C T G A T C G C G T A A G T C G T C A A C G T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A