Information for 5-ACTGACGCCT (Motif 3)

C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A C T G A G C T A G T C C G T A A T C G G C A T
p-value:1e-14
log p-value:-3.263e+01
Information Content per bp:1.857
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.86%
Number of Background Sequences with motif59.4
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets42.9 +/- 28.5bp
Average Position of motif in Background51.6 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:ACTGACGCCT
--TGACACCT
 C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ACTGACGCCT----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

TBX4/MA0806.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ACTGACGCCT
--TCACACCT
 C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACTGACGCCT----
ATAAATGACACCTATCA
 A C G T A C G T A C G T C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ACTGACGCCT
--TCACACCT
 C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACTGACGCCT----
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

CREB1/MA0018.2/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACTGACGCCT
--TGACGTCA
 C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACTGACGCCT
--TGACCYCT
 C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACTGACGCCT
--TCACACCT
 C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ACTGACGCCT----
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T C G T A A T G C A C G T A C T G T C G A G T A C T A C G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T