Information for 11-CCAGTGGCAC (Motif 17)

A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C
Reverse Opposite:
A C T G C G A T A T C G A T G C G T A C C T G A A T G C C G A T T A C G A T C G
p-value:1e-7
log p-value:-1.837e+01
Information Content per bp:1.825
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif211.0
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets48.4 +/- 24.1bp
Average Position of motif in Background53.0 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCAGTGGCAC-
--NTTGGCANN
 A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCAGTGGCAC
-GGTTGGCAT
 A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCAGTGGCAC-
-NNTTGGCANN
 A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCAGTGGCAC---
TGCGGAGTGGGACTGG
 A C G T A C G T A C G T A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCAGTGGCAC-
ATTGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCAGTGGCAC
---TTGGCA-
 A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTGGCAC
NTCAAGTGGN--
 A C G T A C G T A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCAGTGGCAC--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTGGCAC
NTCAAGTGG---
 A C G T A C G T A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CCAGTGGCAC-
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C T A A T C G G A C T A C T G A T C G A T G C C G T A T G A C A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A