Information for 1-RSYGCCMYCTRGTGGY (Motif 1)

C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C
Reverse Opposite:
T C A G T G A C A G T C C G T A T A G C G A C T C G T A A C T G C T A G C A G T C T A G C A T G G T A C T C G A T A G C G A C T
p-value:1e-698
log p-value:-1.607e+03
Information Content per bp:1.631
Number of Target Sequences with motif437.0
Percentage of Target Sequences with motif47.92%
Number of Background Sequences with motif288.3
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets51.8 +/- 22.7bp
Average Position of motif in Background54.4 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.97
Offset:-2
Orientation:forward strand
Alignment:--RSYGCCMYCTRGTGGY--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-RSYGCCMYCTRGTGGY--
TAGCGCCCCCTGGTGGCCA
 A C G T C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.96
Offset:-4
Orientation:forward strand
Alignment:----RSYGCCMYCTRGTGGY
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:RSYGCCMYCTRGTGGY
---GCCATCTGTT---
 C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---RSYGCCMYCTRGTGGY
GGTCCCGCCCCCTTCTC--
 A C G T A C G T A C G T C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RSYGCCMYCTRGTGGY
GCCGCCATCTTG----
 C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RSYGCCMYCTRGTGGY-
--GGCCYCCTGCTGDGH
 C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RSYGCCMYCTRGTGGY-
---CCCCCCCGGGGGNN
 C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:RSYGCCMYCTRGTGGY-
--GACCCCCCGCTGTGC
 C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C A C G T
A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RSYGCCMYCTRGTGGY
GCNGCCATCTTG----
 C T G A A T C G A G C T C A T G G T A C A G T C G T C A A G T C G T A C G C A T C T G A A T C G G C A T A C T G A C T G A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T A C G T