Information for 11-CGCCACGCTG (Motif 22)

T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C A C T G A C G T C T A G A T C G A G T C A C T G
p-value:1e-6
log p-value:-1.605e+01
Information Content per bp:1.929
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif56.8
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets38.8 +/- 18.2bp
Average Position of motif in Background50.6 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CGCCACGCTG
---CACGCA-
 T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CGCCACGCTG---
---CCTGCTGAGH
 T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0147.1_Max_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGCCACGCTG---
GTGCCACGCGACTG
 A C G T T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------CGCCACGCTG
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CGCCACGCTG
-----NGCTN
 T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

Hes1/MA1099.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCCACGCTG-
-GGCACGCGTC
 T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T
A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGCCACGCTG--
GACCCCCCGCTGTG
 A C G T A C G T T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGCCACGCTG---
GACCCCCCGCTGCGC
 A C G T A C G T T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCCACGCTG-----
NNTCCTGCTGTGNNN
 T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCCACGCTG---
NNGGCCACGCCTTTN
 A C G T A C G T T G A C A C T G A T G C A G T C C G T A A G T C A C T G A G T C A C G T A C T G A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G