Information for 6-CTTTMTATGGTGT (Motif 5)

G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T
Reverse Opposite:
C T G A G A T C C T G A G T A C A G T C T C G A C A G T C T G A A C G T G T C A G T C A C G T A A C T G
p-value:1e-14
log p-value:-3.334e+01
Information Content per bp:1.693
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif95.4
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets58.6 +/- 25.0bp
Average Position of motif in Background49.8 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTTTMTATGGTGT
CCATATATGG---
 G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTTTMTATGGTGT
NNCGTTGCTATGGNN-
 A C G T A C G T A C G T G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A A C G T

HLTF/MA0109.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTTTMTATGGTGT
--NNATAAGGNN-
 G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T
A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTTMTATGGTGT-
--NNHTGTGGTTWN
 G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTTMTATGGTGT
TNCCATATATGG---
 A C G T A C G T G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTTMTATGGTGT
TNCCATATATGGNA-
 A C G T A C G T G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTTTMTATGGTGT
---GCTGTGGTTT
 G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T
A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTTTMTATGGTGT---
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTTTMTATGGTGT----
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

SRF/MA0083.3/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTTTMTATGGTGT
TGNCCATATATGGTCA
 A C G T A C G T A C G T G T A C A C G T C A G T C A G T G T C A A G C T G T C A A C G T A C T G A C T G A G C T C T A G G A C T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A