Information for 16-ACTGCTTATGAAVHAA (Motif 28)

C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A
Reverse Opposite:
A C G T C G A T C G T A A G T C A G C T A G C T T G A C C G T A A C G T C G T A C G T A A C T G G T A C T G C A A T C G A C G T
p-value:1e-8
log p-value:-1.869e+01
Information Content per bp:1.807
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 20.8bp
Average Position of motif in Background47.0 +/- 48.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCTTATGAAVHAA
NTNTTCTTATCAGTNTN
 A C G T C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACTGCTTATGAAVHAA
TATTGTTTATT------
 A C G T C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ACTGCTTATGAAVHAA--
----AATATTAATAAAGA
 C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PH0155.1_Prrx2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACTGCTTATGAAVHAA-
AAAGCTAATTAGCGAAA
 C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

PH0097.1_Lhx6_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCTTATGAAVHAA
NNNCGCTAATTAGNNGA
 A C G T C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

PB0023.1_Gata6_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCTTATGAAVHAA
NNANTCTTATCTNNNNN
 A C G T C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

PB0096.1_Zfp187_1/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACTGCTTATGAAVHAA---
-----TTATGTACTAATAA
 C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

PH0098.1_Lhx8/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ACTGCTTATGAAVHAA
CACCGCTAATTAGNNGN
 A C G T C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACTGCTTATGAAVHAA
AATTTGCTGAC-------
 A C G T A C G T C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ACTGCTTATGAAVHAA
--AGCTCATTAT----
 C G T A A T G C A C G T A C T G A G T C A C G T A C G T C G T A A C G T A C T G C T G A C T G A T A C G G A C T C G T A C G T A
A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T A C G T