Information for 13-ACRAGGCCACAAA (Motif 21)

C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A
Reverse Opposite:
A G C T A C G T C G A T A C T G A C G T A T C G C T A G A G T C A G T C A C G T A G T C A T C G C G A T
p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.677
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif93.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets58.3 +/- 21.6bp
Average Position of motif in Background51.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACRAGGCCACAAA
-CAAGGHCANV--
 C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACRAGGCCACAAA
-CTAGGCCT----
 C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACRAGGCCACAAA
--AAGGTCAC---
 C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACRAGGCCACAAA
NTCAAGGTCA----
 A C G T C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACRAGGCCACAAA
BTCAAGGTCA----
 A C G T C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACRAGGCCACAAA
-CNAGGCCT----
 C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACRAGGCCACAAA-
---AAACCACAGAN
 C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ACRAGGCCACAAA--
---RGGGCACTAACY
 C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A A C G T A C G T
A C G T A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACRAGGCCACAAA
TCAAGGTCAN---
 C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACRAGGCCACAAA
-TRAGGTCA----
 C G T A A T G C C T A G G T C A C T A G T A C G A G T C T A G C G T C A T A G C C G T A T G C A C T G A
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T