p-value: | 1e-10 |
log p-value: | -2.410e+01 |
Information Content per bp: | 1.711 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.95% |
Number of Background Sequences with motif | 7.7 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 43.3 +/- 21.4bp |
Average Position of motif in Background | 61.7 +/- 18.3bp |
Strand Bias (log2 ratio + to - strand density) | 1.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGGCTARGAASCCAGC TTGGCANNNTGCCAAG- |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGCTARGAASCCAGC CTGGCAGNCTGCCA--- |
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NFIC::TLX1/MA0119.1/Jaspar
Match Rank: | 3 |
Score: | 0.53 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGGCTARGAASCCAGC TGGCACCATGCCAA-- |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGCTARGAASCCAGC TTGGCA----------- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 5 |
Score: | 0.53 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGGCTARGAASCCAGC NTTGGCANN--------- |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 6 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGGCTARGAASCCAGC TTGCCAAG--------- |
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Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
Match Rank: | 7 |
Score: | 0.51 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGGCTARGAASCCAGC KGTTGCTAGGMAACA--- |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 8 |
Score: | 0.48 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGGCTARGAASCCAGC TGATTGGCTANN-------- |
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RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
Match Rank: | 9 |
Score: | 0.48 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TGGCTARGAASCCAGC-- -GGGRAARRGRMCAGMTG |
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Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
Match Rank: | 10 |
Score: | 0.47 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGGCTARGAASCCAGC CSTGGGAAAD-------- |
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