Information for 12-ATAGCTACMAGWT (Motif 16)

C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A C G A T A G T C A C G T A C G T A C T G A C G T G T C A C T A G A G T C A C G T C G T A A C G T
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.912
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.6 +/- 20.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATAGCTACMAGWT--
ACTTGCTACCTACACC
 A C G T C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATAGCTACMAGWT--
ACATGCTACCTAATAC
 A C G T C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------ATAGCTACMAGWT--
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATAGCTACMAGWT
CCGCATAGCAACGGA--
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATAGCTACMAGWT
TACCATAGCAACGGT--
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATAGCTACMAGWT
TACCCTAGTTACCGA--
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A A C G T A C G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATAGCTACMAGWT--
YTAATTRAWWCCAGATGT
 A C G T A C G T A C G T C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T A C G T A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATAGCTACMAGWT
SCCTAGCAACAG---
 A C G T A C G T C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATAGCTACMAGWT
NTTGATACATT--
 C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ATAGCTACMAGWT
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A C T A G A G T C A C G T C G T A A G T C G T C A C G T A A C T G C G T A A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T