Information for 9-GAAACTGAAAGTT (Motif 13)

A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T
Reverse Opposite:
G T C A C T G A A T G C A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T C G A T A G T C
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.4 +/- 22.7bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GAAACTGAAAGTT
GAAAGTGAAAGT-
 A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GAAACTGAAAGTT
GAAACTGAAACT-
 A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:3
Score:0.86
Offset:0
Orientation:forward strand
Alignment:GAAACTGAAAGTT
GAAASYGAAASY-
 A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GAAACTGAAAGTT
GRAASTGAAAST-
 A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GAAACTGAAAGTT
GAAAMTGAAACT-
 A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----GAAACTGAAAGTT---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GAAACTGAAAGTT-
GGAAANTGAAACTNA
 A C G T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GAAACTGAAAGTT
TCGAAACCGAAACT-
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GAAACTGAAAGTT
ACGAAAGCGAAAGT-
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GAAACTGAAAGTT-
AGAAAGTGAAAGTGA
 A C G T A C T G C G T A C G T A C G T A A G T C A C G T A C T G C G T A C G T A C G T A A T C G A G C T A C G T A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A