p-value: | 1e-7 |
log p-value: | -1.702e+01 |
Information Content per bp: | 1.938 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.28% |
Number of Background Sequences with motif | 64.3 |
Percentage of Background Sequences with motif | 0.14% |
Average Position of motif in Targets | 51.9 +/- 22.4bp |
Average Position of motif in Background | 45.6 +/- 30.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer
Match Rank: | 1 |
Score: | 0.80 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CTGGTCTGGG- GGGGCTYGKCTGGGA |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CTGGTCTGGG VBSYGTCTGG- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGGTCTGGG -CTGTCTGG- |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 4 |
Score: | 0.68 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTGGTCTGGG-- --GGTCTGGCAT |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.66 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CTGGTCTGGG---- NNTNNTGTCTGGNNTNG |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 6 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CTGGTCTGGG -TWGTCTGV- |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTGGTCTGGG-- --WDNCTGGGCA |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGGTCTGGG CTGTTCCTGG |
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INSM1/MA0155.1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | CTGGTCTGGG---- --TGTCAGGGGGCG |
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ZEB1/MA0103.2/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTGGTCTGGG CAGGTGAGG- |
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