Information for 5-TTGGCTGGGC (Motif 8)

G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C
Reverse Opposite:
A T C G G A T C A T G C G T A C C T G A T A C G G A T C T G A C G C T A C T G A
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.665
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif7.87%
Number of Background Sequences with motif1542.3
Percentage of Background Sequences with motif3.21%
Average Position of motif in Targets48.0 +/- 27.3bp
Average Position of motif in Background48.8 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TTGGCTGGGC-
-WDNCTGGGCA
 G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C A C G T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TTGGCTGGGC----
GTATTGGGTGGGTAATT
 A C G T A C G T A C G T G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTGGCTGGGC
TWGTCTGV--
 G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TTGGCTGGGC
GGGGCTYGKCTGGGA
 A C G T A C G T A C G T A C G T A C G T G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTGGCTGGGC
TTGGCA----
 G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTGGCTGGGC-
CGTGGGTGGTCC
 A C G T G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTGGCTGGGC---
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCTGGGC
TGATTGGCTANN-
 A C G T A C G T A C G T G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCTGGGC
NTTGGCANN--
 A C G T G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

EGR4/MA0733.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCTGGGC----
AANTGCGTGGGCGTNN
 A C G T A C G T G A C T C G A T A C T G C T A G A T G C G A C T C A T G T A C G C T A G T A G C A C G T A C G T A C G T A C G T
C G T A C G T A C G T A A C G T T C A G T A G C T C A G C A G T T C A G A C T G T C A G G T A C T C A G C A G T C T G A C T G A