Information for 7-GGAGGGCAGTGAC (Motif 9)

C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C
Reverse Opposite:
A C T G A G C T A G T C C G T A A G T C A C G T A C T G A G T C A G T C A G T C A C G T A G T C G A T C
p-value:1e-10
log p-value:-2.527e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.6 +/- 20.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGAGGGCAGTGAC--
-NAGGTCANTGACCT
 C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C A C G T A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGAGGGCAGTGAC---
NNNANTGCAGTGCNNTT
 A C G T C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAGGGCAGTGAC
TNNGGGCAG----
 C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GGAGGGCAGTGAC-
------NCGTGACN
 C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAGGGCAGTGAC-
--RGGGCACTAACY
 C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C A C G T
A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGAGGGCAGTGAC
----GGCVGTTR-
 C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C
A C G T A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAGGGCAGTGAC
NGTGGGCAT----
 C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAGGGCAGTGAC
TRAGGTCA-----
 C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGAGGGCAGTGAC
AGRGGTCA-----
 C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GGAGGGCAGTGAC
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G C G T A C T A G A C T G A C T G A G T C C G T A A C T G A C G T A C T G C T G A A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C