Information for 1-AKTCAVAAAGGCATGA (Motif 3)

C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A C G A T A T C G A T G C A G T C G A C T C G A T A C G T A C T G C A G T T A C G C T G A T G A C A G C T
p-value:1e-16
log p-value:-3.904e+01
Information Content per bp:1.699
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif23.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets54.6 +/- 21.4bp
Average Position of motif in Background49.5 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.58
Offset:11
Orientation:forward strand
Alignment:AKTCAVAAAGGCATGA-
-----------CATGAC
 C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

TEAD3/MA0808.1/Jaspar

Match Rank:2
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:AKTCAVAAAGGCATGA
--------TGGAATGT
 C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AKTCAVAAAGGCATGA----
-----CAAAGGCGTGGCCAG
 C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AKTCAVAAAGGCATGA----
---TATTATGGGATGGATAA
 C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AKTCAVAAAGGCATGA
AAACAGACAAAGGAAT--
 A C G T A C G T C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AKTCAVAAAGGCATGA-
-------NTGGAATGTG
 C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.51
Offset:10
Orientation:reverse strand
Alignment:AKTCAVAAAGGCATGA--
----------NCGTGACN
 C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AKTCAVAAAGGCATGA
---AACAAAGG-----
 C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.50
Offset:7
Orientation:forward strand
Alignment:AKTCAVAAAGGCATGA-
-------ATGGGGTGAT
 C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AKTCAVAAAGGCATGA
---RACAAWGG-----
 C T G A A C T G A G C T A T G C G T C A T A G C T C G A C G T A C T G A A C T G T A C G T A G C C G T A A C G T A C T G C T G A
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T