Information for 4-TTCTGAACTAGTG (Motif 6)

A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G A T C G T A A C T G A C G T C G A T A G T C C G T A C T A G C G T A C G T A
p-value:1e-8
log p-value:-2.060e+01
Information Content per bp:1.941
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.2 +/- 6.8bp
Average Position of motif in Background76.0 +/- 4.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTCTGAACTAGTG---
GANGTTAACTAGTTTNN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TTCTGAACTAGTG
--GTTAACTAGN-
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCTGAACTAGTG-
TTATGTACTAATAA
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTCTGAACTAGTG---
--TTGACCTANTTATN
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PH0168.1_Hnf1b/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTCTGAACTAGTG--
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTCTGAACTAGTG
---TGACCTARTT
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

HOXA5/MA0158.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:TTCTGAACTAGTG
-----AATTAGTG
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTCTGAACTAGTG------
---TGACCCAGTGACCTAC
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TTCTGAACTAGTG
---TGACCTTGAT
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TTCTGAACTAGTG-------
GNCTGTASTRNTGBCTCHTT
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T