Information for 1-GAAAHHAAAABAAAGT (Motif 3)

A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T
Reverse Opposite:
T C G A G A T C A C G T A C G T A C G T T A G C A C G T A C G T A C G T A C G T C A T G C A G T A C G T A C G T A C G T A G T C
p-value:1e-10
log p-value:-2.397e+01
Information Content per bp:1.825
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.80%
Number of Background Sequences with motif13.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.5 +/- 19.8bp
Average Position of motif in Background59.3 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAAAHHAAAABAAAGT-
-ATATCAAAACAAAACA
 A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T A C G T
A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAAHHAAAABAAAGT
AACAAACAACAAGAG---
 A C G T A C G T A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAAHHAAAABAAAGT-
AACACCAAAACAAAGGA
 A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAAAHHAAAABAAAGT
GGAAANTGAAACTNA--
 A C G T A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAAHHAAAABAAAGT
CAAAAGTAAACAAAG-
 A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAHHAAAABAAAGT
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAAAHHAAAABAAAGT
GAAASYGAAASY----
 A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAAHHAAAABAAAGT
GAAAMTGAAACT----
 A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAAHHAAAABAAAGT
CAAACAACAACACCT-
 A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAAAHHAAAABAAAGT----
---AGAAGAACAAAGGACTA
 A C T G C G T A C G T A C G T A G C T A G A T C C G T A G T C A C G T A C G T A A C T G C G T A C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A