Information for 3-GMTCAGAATT (Motif 10)

A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T
Reverse Opposite:
C G T A C G T A G A C T C G A T A G T C A C G T C T A G C T G A C A G T A T G C
p-value:1e-7
log p-value:-1.701e+01
Information Content per bp:1.805
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif6.07%
Number of Background Sequences with motif411.6
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets37.3 +/- 26.3bp
Average Position of motif in Background48.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GMTCAGAATT-----
TATCATAATTAAGGA
 A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PB0023.1_Gata6_1/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GMTCAGAATT-
TATAGAGATAAGAATTG
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GMTCAGAATT
TGCTGTGATTT
 A C G T A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GMTCAGAATT----
AAGATCGGAANTNNNA
 A C G T A C G T A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------GMTCAGAATT----
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

POL002.1_INR/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GMTCAGAATT
--TCAGTCTT
 A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GMTCAGAATT----
NNNTAACAATTATAN
 A C G T A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GMTCAGAATT-
GKVTCADRTTWC
 A C G T A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GMTCAGAATT
GCAGTGATTT
 A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GMTCAGAATT--
NNCNNAACAATTNT
 A C G T A C G T A T C G G T C A G A C T A G T C C G T A C T A G C G T A C G T A A C G T C G A T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T