p-value: | 1e-6 |
log p-value: | -1.518e+01 |
Information Content per bp: | 1.884 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.81% |
Number of Background Sequences with motif | 5.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 43.8 +/- 29.8bp |
Average Position of motif in Background | 56.1 +/- 21.3bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.25 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PITX3/MA0714.1/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGATTWGGARRR GGGATTANN---- |
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GSC/MA0648.1/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGGATTWGGARRR NNGGATTAGN---- |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGGATTWGGARRR VRGGATTARN---- |
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GSC2/MA0891.1/Jaspar
Match Rank: | 4 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGGATTWGGARRR GNGGATTAGN---- |
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Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
Match Rank: | 5 |
Score: | 0.71 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGGATTWGGARRR NGGGATTA------ |
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GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
Match Rank: | 6 |
Score: | 0.71 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGGATTWGGARRR RGGATTAR----- |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 7 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGATTWGGARRR -GGATTAGC---- |
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Pitx1/MA0682.1/Jaspar
Match Rank: | 8 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGATTWGGARRR GGGATTAA----- |
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PH0137.1_Pitx1/Jaspar
Match Rank: | 9 |
Score: | 0.68 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GGGATTWGGARRR TTAGAGGGATTAACAAT- |
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PH0139.1_Pitx3/Jaspar
Match Rank: | 10 |
Score: | 0.68 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGGATTWGGARRR AGGGGGATTAGCTGCC |
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