Information for 11-AATTCATCCTTTC (Motif 18)

C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A G T C A C G T A C T A G A C T G C G T A C A G T A C T G C G T A C G T A A C G T A C G T
p-value:1e-8
log p-value:-1.888e+01
Information Content per bp:1.937
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets26.2 +/- 18.5bp
Average Position of motif in Background81.1 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0129.1_Otx1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AATTCATCCTTTC-
NNNAATTAATCCCCNCN
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AATTCATCCTTTC-
GNNNATTAATCCCTNCN
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AATTCATCCTTTC-
GATAATTAATCCCTCTT
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PH0130.1_Otx2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AATTCATCCTTTC-
GANNATTAATCCCTNNN
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

SPI1/MA0080.4/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATTCATCCTTTC
TACTTCCGCTTTTT
 A C G T C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C
G C A T C T G A T A G C C G A T C A G T A T G C G A T C A C T G A T G C G C A T C G A T G C A T G A C T A G C T

PH0124.1_Obox5_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AATTCATCCTTTC-
NANANTTAATCCCNNNN
 A C G T A C G T A C G T C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0044.1_Homez/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATTCATCCTTTC----
AAAACATCGTTTTTAAG
 C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AATTCATCCTTTC-----
NTGACTCANTTTTTCCANTN
 A C G T A C G T C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AATTCATCCTTTC
CACTTCCYCTTT--
 A C G T C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C
T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AATTCATCCTTTC--
NNNATTAATCCGNTTNA
 A C G T A C G T C G T A C G T A A C G T A C G T G T A C G T C A A C G T A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A